. |
|
Candidatus Methylomirabilis oxyfera uid161981 |
Nitrospirae |
Nitrospirales |
Leptospirillum ferriphilum ML 04 uid175904 |
(nodes 1517-1520) |
(node 1517) |
Leptospirillum ferrooxidans C2 3 uid158171 |
. |
Nitrospiraceae |
Candidatus Nitrospira defluvii uid51175 |
. |
(nodes 1519-1520) |
Candidatus Poribacteria WGA A3 uid43489 |
. |
|
Thermodesulfovibrio yellowstonii DSM 11347 uid59257 |
Thermodesulfobacteria |
Thermodesulfobacteria |
Thermodesulfatator indicus DSM 15286 uid68285 |
. |
|
Thermodesulfobacterium OPB45 uid68283 |
. |
|
Plautia stali symbiont uid65033 |
. |
|
Candidatus Cloacamonas acidaminovorans Evry uid62959 |
. |
|
Caldithrix abyssi DSM 13497 uid81765 |
Deinococcus-Thermus |
Thermales |
Thermus aquaticus Y51MC23 uid55053 |
(nodes 1524-1540) |
(nodes 1525-1533) |
Thermus CCB US3 UF1 uid81197 |
. |
|
Thermus thermophilus HB27 uid58033 |
. |
|
Thermus scotoductus SA 01 uid62273 |
. |
|
Thermus RLM uid156767 |
. |
|
Thermus oshimai JL 2 uid178948 |
. |
|
Meiothermus ruber DSM 1279 uid46661 |
. |
|
Meiothermus silvanus DSM 9946 uid49485 |
. |
|
Marinithermus hydrothermalis DSM 14884 uid65783 |
. |
|
Oceanithermus profundus DSM 14977 uid60855 |
. |
Deinococcus |
Truepera radiovictrix DSM 17093 uid49533 |
. |
(nodes 1534-1540) |
Deinococcus peraridilitoris DSM 19664 uid183485 |
. |
|
Deinococcus maricopensis DSM 21211 uid62225 |
. |
|
Deinococcus proteolyticus MRP uid63399 |
. |
|
Deinococcus geothermalis DSM 11300 uid58275 |
. |
|
Deinococcus gobiensis I 0 uid162509 |
. |
|
Deinococcus deserti VCD115 uid58615 |
. |
|
Deinococcus radiodurans R1 uid57665 |
Dictyoglomi |
Dictyoglomi |
Dictyoglomus thermophilum H 6 12 uid59439 |
(node 1544) |
(node 1544) |
Dictyoglomus turgidum DSM 6724 uid59177 |
. |
|
Thermodesulfobium narugense DSM 14796 uid66601 |
. |
|
Coprothermobacter proteolyticus DSM 5265 uid59253 |
. |
|
Caldisericum exile AZM16c01 uid158173 |
Thermotogae |
Thermotogae |
Kosmotoga olearia TBF 19 5 1 uid59205 |
(nodes 1547-1561) |
(nodes 1547-1561) |
Mesotoga prima MesG1 Ag 4 2 uid52599 |
. |
|
Marinitoga piezophila KA3 uid81629 |
. |
|
Petrotoga mobilis SJ95 uid58747 |
. |
|
Thermotoga lettingae TMO uid58419 |
. |
|
Thermotoga thermarum DSM 5069 uid68449 |
. |
|
Thermosipho africanus TCF52B uid59095 |
. |
|
Thermosipho melanesiensis BI429 uid58683 |
. |
|
Fervidobacterium nodosum Rt17 B1 uid58625 |
. |
|
Fervidobacterium pennivorans DSM 9078 uid78143 |
. |
|
Thermotoga petrophila RKU 1 uid58655 |
. |
|
Thermotoga maritima MSB8 uid57723 |
. |
|
Thermotoga naphthophila RKU 10 uid42777 |
. |
|
Thermotoga neapolitana DSM 4359 uid59065 |
. |
|
Thermotoga RQ2 uid58935 |
. |
|
Thermotoga EMP uid174473 |
Synergistetes |
Synergistetes |
Anaerobaculum hydrogeniformans ATCC BAA 1850 uid55759 |
(nodes 1562-1571) |
(nodes 1562-1571) |
Anaerobaculum mobile DSM 13181 uid168323 |
. |
|
Thermovirga lienii DSM 17291 uid77129 |
. |
|
Synergistes 3 1 syn1 uid80429 |
. |
|
Aminomonas paucivorans DSM 12260 uid60577 |
. |
|
Thermanaerovibrio acidaminovorans DSM 6589 uid41925 |
. |
|
Thermanaerovibrio velox DSM 12556 uid80703 |
. |
|
Aminobacterium colombiense DSM 12261 uid47083 |
. |
|
Dethiosulfovibrio peptidovorans DSM 11002 uid54917 |
. |
|
Jonquetella anthropi DSM 22815 uid182031 |
. |
|
Pyramidobacter piscolens W5455 uid42959 |
Chloroflexi |
Chloroflexi |
Herpetosiphon aurantiacus DSM 785 uid58599 |
(nodes 1572-1589) |
Chloroflexales |
Roseiflexus castenholzii DSM 13941 uid58287 |
. |
(nodes 1575-1578 |
Roseiflexus RS 1 uid58523 |
. |
|
Oscillochloris trichoides DG6 uid59465 |
. |
|
Chloroflexus aggregans DSM 9485 uid58621 |
. |
|
Chloroflexus aurantiacus J 10 fl uid57657 |
. |
|
Thermobaculum terrenum ATCC BAA 798 uid42011 |
. |
|
Thermomicrobium roseum DSM 5159 uid59341 |
. |
Sphaerobacterales |
Nitrolancetus hollandicus Lb uid168185 |
. |
(node 1581) |
Sphaerobacter thermophilus DSM 20745 uid41997 |
. |
|
Ktedonobacter racemifer DSM 44963 uid49671 |
. |
Dehalococcoidetes |
Dehalogenimonas lykanthroporepellens BL DC 9 uid48131 |
. |
(nodes 1584-1588) |
Dehalococcoides VS uid42393 |
. |
|
Dehalococcoides mccartyi BTF08 uid190183 |
. |
|
Dehalococcoides CBDB1 uid58413 |
. |
|
Dehalococcoides BAV1 uid58477 |
. |
|
Dehalococcoides ethenogenes 195 uid57763 |
. |
|
Anaerolinea thermophila UNI 1 uid62245 |
. |
|
Caldilinea aerophila DSM 14535 NBRC 104270 uid158165 |
Clostridia |
Clostridiaceae |
Clostridium nexile DSM 1787 uid55077 |
(nodes 1591-1819) |
(nodes 1602-1649) |
Clostridium hylemonae DSM 15053 uid55299 |
. |
|
Clostridium scindens ATCC 35704 uid54533 |
. |
|
Dorea formicigenerans 4 6 53AFAA uid73033 |
. |
|
Dorea longicatena DSM 13814 uid54515 |
. |
|
Clostridium D5 uid63427 |
. |
|
Ruminococcus gnavus ATCC 29149 uid54537 |
. |
|
Ruminococcus torques ATCC 27756 uid54511 |
. |
|
Ruminococcus lactaris ATCC 29176 uid54903 |
. |
|
Bryantella formatexigens DSM 14469 uid54943 |
. |
|
Blautia hansenii DSM 20583 uid55275 |
. |
|
Blautia hydrogenotrophica DSM 10507 uid54939 |
. |
|
Ruminococcus 5 1 39BFAA uid55629 |
. |
|
Ruminococcus obeum ATCC 29174 uid54509 |
. |
|
Roseburia hominis A2 183 uid73419 |
. |
|
Roseburia intestinalis L1 82 uid55267 |
. |
|
Shuttleworthia satelles DSM 14600 uid55775 |
. |
|
Eubacterium rectale ATCC 33656 uid59169 |
. |
|
Clostridium SY8519 uid68705 |
. |
|
Butyrivibrio proteoclasticus B316 uid51489 |
. |
|
Eubacterium cellulosolvens 6 uid61055 |
. |
|
Eubacterium eligens ATCC 27750 uid59171 |
. |
|
Butyrivibrio crossotus DSM 2876 uid55091 |
. |
|
Bacteroides pectinophilus ATCC 43243 uid54987 |
. |
|
Johnsonella ignava ATCC 51276 uid77897 |
. |
|
Eubacterium saburreum DSM 3986 uid61491 |
. |
|
Lachnospiraceae oral taxon 107 F0167 uid66385 |
. |
|
Clostridium M62 1 uid54557 |
. |
|
Clostridium symbiosum WAL 14163 uid63097 |
. |
|
Clostridium bolteae ATCC BAA 613 uid54523 |
. |
|
Clostridium clostridioforme 2 1 49FAA uid76955 |
. |
|
Clostridium citroniae WAL 17108 uid76581 |
. |
|
Clostridiales bacterium 1 7 47FAA uid55287 |
. |
|
Clostridium hathewayi DSM 13479 uid55373 |
. |
|
Clostridium saccharolyticum WM1 uid51419 |
. |
|
Oribacterium oral taxon 078 F0262 uid55773 |
. |
|
Oribacterium sinus F0268 uid55891 |
. |
|
Oribacterium ACB7 uid79229 |
. |
|
Oribacterium ACB1 uid79231 |
. |
|
Oribacterium ACB8 uid170518 |
. |
|
Eubacterium ventriosum ATCC 27560 uid54517 |
. |
|
Clostridium phytofermentans ISDg uid58519 |
. |
|
Clostridium L2 50 uid54559 |
. |
|
Coprococcus eutactus ATCC 27759 uid54541 |
. |
|
Eubacterium hallii DSM 3353 uid54535 |
. |
|
Anaerostipes 3 2 56FAA uid61867 |
. |
|
Anaerostipes caccae DSM 14662 uid54561 |
. |
|
Clostridium SS2 1 uid54553 |
. |
|
Eubacterium hadrum DSM 3319 uid183778 |
. |
|
Clostridium lentocellum DSM 5427 uid49117 |
. |
|
Oscillibacter valericigenes uid73895 |
. |
|
Ruminococcaceae bacterium D16 uid52825 |
. |
|
Bacteroides capillosus ATCC 29799 uid54531 |
. |
|
Flavonifractor plautii ATCC 29863 uid80691 |
. |
Ruminococcaceae |
Clostridium methylpentosum DSM 5476 uid55281 |
. |
(nodes 1654-1664) |
Eubacterium siraeum DSM 15702 uid54603 |
. |
|
Ruminococcus albus 7 uid51721 |
. |
|
Ruminococcus flavefaciens FD 1 uid55965 |
. |
|
Clostridium leptum DSM 753 uid54605 |
. |
|
Clostridium MSTE9 uid180497 |
. |
|
Anaerotruncus colihominis DSM 17241 uid54807 |
. |
|
Ethanoligenens harbinense YUAN 3 uid46255 |
. |
|
Subdoligranulum 4 3 54A2FAA uid80415 |
. |
|
Subdoligranulum variabile DSM 15176 uid54539 |
. |
|
Faecalibacterium cf prausnitzii KLE1255 uid60645 |
. |
|
Faecalibacterium prausnitzii A2 165 uid54551 |
. |
|
Clostridiales genomosp BVAB3 UPII9 5 uid46219 |
. |
Clostridiaceae |
Clostridium stercorarium DSM 8532 uid186819 |
. |
(nodes 1665-1670 |
Clostridium cellulolyticum H10 uid58709 |
. |
|
Clostridium BNL1100 uid84307 |
. |
|
Clostridium papyrosolvens DSM 2782 uid55815 |
. |
|
Clostridium thermocellum ATCC 27405 uid57917 |
. |
|
Acetivibrio cellulolyticus CD2 uid51533 |
. |
|
Clostridium clariflavum DSM 19732 uid82345 |
. |
Family III |
Caldicellulosiruptor saccharolyticus DSM 8903 uid58289 |
. |
(nodes 1672-1677) |
Caldicellulosiruptor bescii DSM 6725 uid59201 |
. |
|
Caldicellulosiruptor kronotskyensis 2002 uid60491 |
. |
|
Caldicellulosiruptor hydrothermalis 108 uid60157 |
. |
|
Caldicellulosiruptor kristjanssonii 177R1B uid60393 |
. |
|
Caldicellulosiruptor lactoaceticus 6A uid60575 |
. |
|
Caldicellulosiruptor owensensis OL uid60165 |
. |
|
Caldicellulosiruptor obsidiansis OB47 uid51501 |
. |
|
Mahella australiensis 50 1 BON uid66917 |
. |
|
Thermoanaerobacterium thermosaccharolyticum DSM 571 uid51639 |
. |
|
Thermoanaerobacterium xylanolyticum LX 11 uid63163 |
. |
|
Thermoanaerobacterium saccharolyticum JW SL YS485 uid167781 |
. |
Thermoanaerobacteraceae |
Thermoanaerobacter tengcongensis MB4 uid57813 |
. |
(nodes 1683-1690) |
Thermoanaerobacter pseudethanolicus ATCC 33223 uid58339 |
. |
|
Thermoanaerobacter wiegelii Rt8 B1 uid52581 |
. |
|
Thermoanaerobacter X514 uid58589 |
. |
|
Thermoanaerobacter X561 uid55835 |
. |
|
Thermoanaerobacter siderophilus SR4 uid169227 |
. |
|
Thermoanaerobacter brockii finnii Ako 1 uid55639 |
. |
|
Thermoanaerobacter italicus Ab9 uid46241 |
. |
|
Thermoanaerobacter ethanolicus CCSD1 uid55837 |
. |
Clostridiaceae |
Caloramator australicus RC3 uid171387 |
. |
(nodes 1691-1710) |
Candidatus Arthromitus SFB mouse Japan uid71379 |
. |
|
Clostridium perfringens 13 uid57681 |
. |
|
Clostridium butyricum 5521 uid54843 |
. |
|
Clostridium DL VIII uid78327 |
. |
|
Clostridium beijerinckii NCIMB 8052 uid58137 |
. |
|
Clostridium Maddingley MBC34 26 uid178945 |
. |
|
Clostridium 7 2 43FAA uid55597 |
. |
|
Clostridium celatum DSM 1785 uid183779 |
. |
|
Clostridium JC122 uid174326 |
. |
|
Clostridium tetani E88 uid57683 |
. |
|
Clostridium botulinum A2 Kyoto uid59229 |
. |
|
Clostridium sporogenes ATCC 15579 uid54895 |
. |
|
Clostridium carboxidivorans P7 uid48985 |
. |
|
Clostridium kluyveri DSM 555 uid58885 |
. |
|
Clostridium ljungdahlii DSM 13528 uid50583 |
. |
|
Clostridium novyi NT uid58643 |
. |
|
Clostridium cellulovorans 743B uid51503 |
. |
|
Clostridium acetobutylicum ATCC 824 uid57677 |
. |
|
Clostridium arbusti SL206 uid171987 |
. |
|
Clostridium pasteurianum DSM 525 uid185802 |
. |
|
Anaerofustis stercorihominis DSM 17244 uid54805 |
. |
|
Acetobacterium woodii DSM 1030 uid88073 |
. |
|
Pseudoramibacter alactolyticus ATCC 23263 uid61507 |
. |
|
Eubacterium limosum KIST612 uid59777 |
. |
|
Eubacterium saphenum ATCC 49989 uid55765 |
. |
Family XIII |
Eubacterium infirmum F0142 uid81785 |
. |
(node 1718) |
Mogibacterium CM50 uid174240 |
. |
Family XI |
Peptoniphilus oral taxon 375 F0436 uid71189 |
. |
(nodes 1719-1732) |
Peptoniphilus duerdenii ATCC BAA 1640 uid51739 |
. |
|
Peptoniphilus indolicus ATCC 29427 uid74031 |
. |
|
Peptoniphilus lacrimalis 315 B uid42973 |
. |
|
Peptoniphilus harei ACS 146 V Sch2b uid61041 |
. |
|
Peptoniphilus rhinitidis 1 13 uid171988 |
. |
|
Parvimonas micra ATCC 33270 uid54527 |
. |
|
Parvimonas oral taxon 110 F0139 uid67821 |
. |
|
Finegoldia magna ATCC 29328 uid58867 |
. |
|
Helcococcus kunzii ATCC 51366 uid83005 |
. |
|
Anaerococcus hydrogenalis ACS 025 V Sch4 uid63589 |
. |
|
Anaerococcus vaginalis ATCC 51170 uid56001 |
. |
|
Anaerococcus lactolyticus ATCC 51172 uid55391 |
. |
|
Anaerococcus prevotii DSM 20548 uid59219 |
. |
|
Anaerococcus tetradius ATCC 35098 uid55461 |
. |
|
Clostridium acidurici 9a uid176126 |
. |
Peptostreptococcaceae |
Peptostreptococcus anaerobius 653 L uid46195 |
. |
(nodes 1736-1739) |
Peptostreptococcus stomatis DSM 17678 uid52563 |
. |
|
Clostridium hiranonis DSM 13275 uid55075 |
. |
|
Clostridium bartlettii DSM 16795 uid54809 |
. |
|
Clostridium difficile 630 uid57679 |
. |
|
Filifactor alocis ATCC 35896 uid46625 |
. |
Eubacteriaceae |
Eubacteriaceae bacterium ACC19a uid79227 |
. |
(nodes 1741-1742) |
Eubacterium AS15 uid173856 |
. |
|
Eubacterium yurii margaretiae ATCC 43715 uid52347 |
. |
|
Alkaliphilus metalliredigens QYMF uid58171 |
. |
|
Alkaliphilus oremlandii OhILAs uid58495 |
. |
Thermoanaerobacterales |
Thermosediminibacter oceani DSM 16646 uid51421 |
. |
(node 1744-1745) |
Tepidanaerobacter acetatoxydans Re1 uid184827 |
. |
|
Tepidanaerobacter Re1 uid66873 |
. |
Family XVII |
Thermaerobacter marianensis DSM 12885 uid61727 |
. |
(node 1747) |
Thermaerobacter subterraneus DSM 13965 uid61053 |
. |
Syntrophomonadaceae |
Syntrophomonas wolfei Goettingen uid58179 |
. |
(node 1748) |
Syntrophothermus lipocalidus DSM 12680 uid49527 |
. |
Halanaerobales |
Halothermothrix orenii H 168 uid58585 |
. |
(nodes 1749-1752) |
Halanaerobium hydrogeniformans uid60191 |
. |
|
Halanaerobium praevalens DSM 2228 uid161959 |
. |
|
Acetohalobium arabaticum DSM 5501 uid51423 |
. |
|
Halobacteroides halobius DSM 5150 uid184862 |
. |
|
Dethiobacter alkaliphilus AHT 1 uid55401 |
. |
|
Natranaerobius thermophilus JW NM WN LF uid59001 |
. |
|
Sulfobacillus acidophilus DSM 10332 uid88061 |
. |
|
Symbiobacterium thermophilum IAM 14863 uid58165 |
. |
Thermoanaerobacterales |
Moorella thermoacetica ATCC 39073 uid58051 |
. |
(node 1759) |
Thermacetogenium phaeum DSM 12270 uid177811 |
. |
Peptococcaceae |
Thermincola potens JR uid48823 |
. |
(nodes 1760-1783) |
Desulfotomaculum kuznetsovii DSM 6115 uid67357 |
. |
|
Desulfotomaculum gibsoniae DSM 7213 uid76945 |
. |
|
Pelotomaculum thermopropionicum SI uid58877 |
. |
|
Desulfotomaculum acetoxidans DSM 771 uid59109 |
. |
|
Desulfotomaculum carboxydivorans CO 1 SRB uid67317 |
. |
|
Desulfotomaculum nigrificans DSM 574 uid63161 |
. |
|
Desulfotomaculum ruminis DSM 2154 uid67507 |
. |
|
Desulfotomaculum hydrothermale Lam5 DSM 18033 uid179385 |
. |
|
Desulfotomaculum reducens MI 1 uid58277 |
. |
|
Candidatus Desulforudis audaxviator MP104C uid59067 |
. |
|
Ammonifex degensii KC4 uid41053 |
. |
|
Carboxydothermus hydrogenoformans Z 2901 uid57821 |
. |
|
Heliobacterium modesticaldum Ice1 uid58279 |
. |
|
Dehalobacter 11DCA uid177715 |
. |
|
Syntrophobotulus glycolicus DSM 8271 uid63343 |
. |
|
Desulfosporosinus acidiphilus SJ4 uid156759 |
. |
|
Desulfosporosinus OT uid72957 |
. |
|
Desulfosporosinus orientis DSM 765 uid82939 |
. |
|
Desulfosporosinus meridiei DSM 13257 uid75097 |
. |
|
Desulfosporosinus youngiae DSM 17734 uid82713 |
. |
|
Desulfitobacterium metallireducens DSM 15288 uid75095 |
. |
|
Desulfitobacterium dichloroeliminans LMG P 21439 uid82555 |
. |
|
Desulfitobacterium dehalogenans ATCC 51507 uid82553 |
. |
|
Desulfitobacterium hafniense DCB 2 uid57749 |
. |
Negativicutes |
Veillonella dispar ATCC 17748 uid55331 |
. |
(nodes 1784-1819) |
Veillonella oral taxon 158 F0412 uid61047 |
. |
|
Veillonella parvula DSM 2008 uid41927 |
. |
|
Veillonella 3 1 44 uid47845 |
. |
|
Veillonella 6 1 27 uid47835 |
. |
|
Veillonella ACP1 uid172974 |
. |
|
Veillonella atypica ACS 049 V Sch6 uid51525 |
. |
|
Veillonella ratti ACS 216 V Col6b uid182889 |
. |
|
Anaeroglobus geminatus F0357 uid80689 |
. |
|
Megasphaera micronuciformis F0359 uid60585 |
. |
|
Megasphaera elsdenii DSM 20460 uid71135 |
. |
|
Megasphaera genomosp type 1 28L uid46567 |
. |
|
Megasphaera UPII 135 E uid71191 |
. |
|
Dialister invisus DSM 15470 uid55761 |
. |
|
Dialister succinatiphilus YIT 11850 uid81763 |
. |
|
Dialister micraerophilus DSM 19965 uid65829 |
. |
|
Dialister microaerophilus UPII 345 E uid61045 |
. |
|
Phascolarctobacterium YIT 12067 uid62745 |
. |
|
Acidaminococcus fermentans DSM 20731 uid43471 |
. |
|
Acidaminococcus D21 uid55871 |
. |
|
Acidaminococcus intestini RyC MR95 uid74445 |
. |
|
Megamonas funiformis YIT 11815 uid82999 |
. |
|
Selenomonas CM52 uid174241 |
. |
|
Selenomonas sputigena ATCC 35185 uid55329 |
. |
|
Selenomonas infelix ATCC 43532 uid76957 |
. |
|
Selenomonas flueggei ATCC 43531 uid55953 |
. |
|
Selenomonas F0473 uid182887 |
. |
|
Selenomonas FOBRC9 uid173853 |
. |
|
Selenomonas artemidis F0399 uid62283 |
. |
|
Selenomonas oral taxon 137 F0430 uid61049 |
. |
|
Selenomonas noxia ATCC 43541 uid55895 |
. |
|
Centipeda periodontii DSM 2778 uid67397 |
. |
|
Mitsuokella multacida DSM 20544 uid55073 |
. |
|
Selenomonas ruminantium lactilytica TAM6421 uid157247 |
. |
|
Pelosinus fermentans A11 uid180746 |
. |
|
Thermosinus carboxydivorans Nor1 uid54463 |
. |
|
Acetonema longum DSM 6540 uid68557 |
Lactobacillales |
Streptococcaceae |
Streptococcus SK643 uid161589 |
(nodes 1822-1956) |
(nodes 1826-1874) |
Streptococcus mitis B6 uid46097 |
. |
|
Streptococcus pneumoniae 670 6B uid52533 |
. |
|
Streptococcus pseudopneumoniae IS7493 uid71153 |
. |
|
Streptococcus GMD4S uid180425 |
. |
|
Streptococcus C300 uid62527 |
. |
|
Streptococcus oralis Uo5 uid65449 |
. |
|
Streptococcus BS35b uid172972 |
. |
|
Streptococcus M143 uid42367 |
. |
|
Streptococcus SK140 uid161587 |
. |
|
Streptococcus peroris ATCC 700780 uid62543 |
. |
|
Streptococcus infantis ATCC 700779 uid180433 |
. |
|
Streptococcus cristatus ATCC 51100 uid179856 |
. |
|
Streptococcus sanguinis SK36 uid58381 |
. |
|
Streptococcus AS14 uid172973 |
. |
|
Streptococcus gordonii Challis substr CH1 uid57667 |
. |
|
Streptococcus 2 1 36FAA uid41507 |
. |
|
Streptococcus australis ATCC 700641 uid179855 |
. |
|
Streptococcus parasanguinis ATCC 15912 uid49313 |
. |
|
Streptococcus intermedius JTH08 uid168614 |
. |
|
Streptococcus anginosus 1 2 62CV uid62163 |
. |
|
Streptococcus constellatus pharyngis SK1060 uid72195 |
. |
|
Streptococcus suis 05ZYH33 uid58663 |
. |
|
Streptococcus macacae NCTC 11558 uid71359 |
. |
|
Streptococcus mutans GS 5 uid169223 |
. |
|
Streptococcus ratti FA 1 uid172632 |
. |
|
Streptococcus criceti uid71271 |
. |
|
Streptococcus downei F0415 uid60561 |
. |
|
Streptococcus thermophilus CNRZ1066 uid58221 |
. |
|
Streptococcus salivarius 57 I uid162151 |
. |
|
Streptococcus vestibularis ATCC 49124 uid62665 |
. |
|
Streptococcus C150 uid62525 |
. |
|
Streptococcus equinus ATCC 9812 uid62297 |
. |
|
Streptococcus infantarius CJ18 uid87033 |
. |
|
Streptococcus bovis ATCC 700338 uid52359 |
. |
|
Streptococcus macedonicus ACA DC 198 uid81631 |
. |
|
Streptococcus agalactiae 2603V R uid57943 |
. |
|
Streptococcus urinalis 2285 97 uid71277 |
. |
|
Streptococcus ictaluri 707 05 uid71275 |
. |
|
Streptococcus equi 4047 uid59259 |
. |
|
Streptococcus canis FSL Z3 227 uid168663 |
. |
|
Streptococcus pyogenes A20 uid178106 |
. |
|
Streptococcus dysgalactiae equisimilis AC 2713 uid178644 |
. |
|
Streptococcus iniae 9117 uid175677 |
. |
|
Streptococcus parauberis KCTC 11537 uid67355 |
. |
|
Streptococcus uberis 0140J uid57959 |
. |
|
Streptococcus porcinus Jelinkova 176 uid66741 |
. |
|
Streptococcus pseudoporcinus LQ 940 04 uid179694 |
. |
|
Lactococcus garvieae ATCC 49156 uid73413 |
. |
|
Lactococcus lactis cremoris A76 uid160937 |
. |
Leuconostocaceae |
Leuconostoc mesenteroides ATCC 8293 uid57919 |
. |
(nodes 1878-1893) |
Leuconostoc pseudomesenteroides 4882 uid171985 |
. |
|
Leuconostoc argentinum KCTC 3773 uid64589 |
. |
|
Leuconostoc citreum KM20 uid58481 |
. |
|
Leuconostoc kimchii IMSNU 11154 uid48589 |
. |
|
Leuconostoc gasicomitatum LMG 18811 uid50385 |
. |
|
Leuconostoc gelidum JB7 uid175682 |
. |
|
Leuconostoc carnosum JB16 uid176371 |
. |
|
Fructobacillus fructosus KCTC 3544 uid68703 |
. |
|
Leuconostoc fallax KCTC 3537 uid66211 |
. |
|
Oenococcus kitaharae DSM 17330 uid81361 |
. |
|
Oenococcus oeni PSU 1 uid59417 |
. |
|
Weissella koreensis KACC 15510 uid68837 |
. |
|
Weissella ceti NC36 uid184763 |
. |
|
Weissella paramesenteroides ATCC 33313 uid55901 |
. |
|
Weissella cibaria KACC 11862 uid66733 |
. |
|
Weissella confusa LBAE C39 2 uid168254 |
. |
Lactobacillaceae_3 |
Lactobacillus pentosus KCA1 uid169225 |
. |
(nodes 1894-1914) |
Lactobacillus plantarum JDM1 uid59361 |
. |
|
Pediococcus claussenii ATCC BAA 344 uid81103 |
. |
|
Pediococcus acidilactici 7 4 uid42365 |
. |
|
Pediococcus pentosaceus ATCC 25745 uid57981 |
. |
|
Lactobacillus suebicus KCTC 3549 uid80667 |
. |
|
Lactobacillus vaginalis ATCC 49540 uid55515 |
. |
|
Lactobacillus reuteri DSM 20016 uid58471 |
. |
|
Lactobacillus antri DSM 16041 uid55491 |
. |
|
Lactobacillus oris F0423 uid179841 |
. |
|
Lactobacillus mucosae LM1 uid86029 |
. |
|
Lactobacillus coleohominis 101 4 CHN uid55977 |
. |
|
Lactobacillus gastricus PS3 uid84443 |
. |
|
Lactobacillus fermentum CECT 5716 uid162003 |
. |
|
Lactobacillus brevis ATCC 367 uid57989 |
. |
|
Lactobacillus malefermentans KCTC 3548 uid80665 |
. |
|
Lactobacillus hilgardii ATCC 8290 uid55501 |
. |
|
Lactobacillus buchneri NRRL B 30929 uid66205 |
. |
|
Lactobacillus kisonensis F0435 uid81769 |
. |
|
Lactobacillus fructivorans KCTC 3543 uid68677 |
. |
|
Lactobacillus florum 2F uid177324 |
. |
|
Lactobacillus sanfranciscensis TMW 1 1304 uid72937 |
. |
Lactobacillaceae_2 |
Lactobacillus mali KCTC 3596 DSM 20444 uid180535 |
. |
(nodes 1915-1919) |
Lactobacillus vini DSM 20605 uid175441 |
. |
|
Lactobacillus animalis KCTC 3501 uid67869 |
. |
|
Lactobacillus ruminis ATCC 27782 uid73417 |
. |
|
Lactobacillus acidipiscis KCTC 13900 uid80675 |
. |
|
Lactobacillus salivarius CECT 5713 uid162005 |
. |
Lactobacillaceae_1 |
Lactobacillus coryniformis CECT 5711 uid180492 |
. |
(nodes 1921-1940) |
Lactobacillus curvatus CRL 705 uid76157 |
. |
|
Lactobacillus sakei 23K uid58281 |
. |
|
Lactobacillus rhamnosus ATCC 8530 uid162169 |
. |
|
Lactobacillus paracasei 8700 2 uid55295 |
. |
|
Lactobacillus zeae KCTC 3804 uid80671 |
. |
|
Lactobacillus versmoldensis KCTC 3814 uid80673 |
. |
|
Lactobacillus iners AB 1 uid51205 |
. |
|
Lactobacillus hominis CRBIP 24 179 uid170497 |
. |
|
Lactobacillus gasseri ATCC 33323 uid57687 |
. |
|
Lactobacillus johnsonii DPC 6026 uid162057 |
. |
|
Lactobacillus jensenii 115 3 CHN uid40897 |
. |
|
Lactobacillus delbrueckii bulgaricus 2038 uid161929 |
. |
|
Lactobacillus equicursoris CIP 110162 uid177398 |
. |
|
Lactobacillus amylolyticus DSM 11664 uid48293 |
. |
|
Lactobacillus ultunensis DSM 16047 uid55513 |
. |
|
Lactobacillus acidophilus 30SC uid63605 |
. |
|
Lactobacillus helveticus DPC 4571 uid58761 |
. |
|
Lactobacillus kefiranofaciens ZW3 uid67985 |
. |
|
Lactobacillus crispatus ST1 uid48359 |
. |
|
Lactobacillus gigeriorum CRBIP 24 85 uid170495 |
. |
|
Lactobacillus pasteurii CRBIP 24 76 uid170496 |
. |
Enterococcaceae |
Melissococcus plutonius ATCC 35311 uid66803 |
. |
(nodes 1941-1946) |
Enterococcus faecalis 62 uid159663 |
. |
|
Enterococcus faecium Aus0004 uid87025 |
. |
|
Enterococcus casseliflavus ATCC 12755 uid63559 |
. |
|
Enterococcus saccharolyticus 30 1 uid76953 |
. |
|
Tetragenococcus halophilus uid74441 |
. |
|
Enterococcus italicus DSM 15952 uid61487 |
. |
Carnobacteriaceae |
Carnobacterium 17 4 uid65789 |
. |
(nodes 1947-1951) |
Carnobacterium AT7 uid54673 |
. |
|
Granulicatella adiacens ATCC 49175 uid55951 |
. |
|
Granulicatella elegans ATCC 700633 uid40873 |
. |
|
Alloiococcus otitis ATCC 51267 uid182884 |
. |
|
Dolosigranulum pigrum ATCC 51524 uid83001 |
. |
Aerococcaceae |
Facklamia hominis CCUG 36813 uid175684 |
. |
(nodes 1952-1956) |
Facklamia languida |
. |
|
Eremococcus coleocola ACS 139 V Col8 uid61037 |
. |
|
Facklamia ignava CCUG 37419 uid175683 |
. |
|
Aerococcus urinae ACS 120 V Col10a uid64757 |
. |
|
Aerococcus viridans ATCC 11563 uid48397 |
Bacillales |
Family XI |
Gemella sanguinis M325 uid66133 |
(nodes 1957-2064) |
(nodes 1961-1962) |
Gemella haemolysans ATCC 10379 uid55327 |
. |
Staphylococcaceae |
Gemella moribillum M424 uid61881 |
. |
(nodes 1963-1975) |
Macrococcus caseolyticus JCSC5402 uid59003 |
. |
|
Staphylococcus carnosus TM300 uid59401 |
. |
|
Staphylococcus pseudintermedius ED99 uid162109 |
. |
|
Staphylococcus lugdunensis HKU09 01 uid46233 |
. |
|
Staphylococcus hominis C80 uid61127 |
. |
|
Staphylococcus haemolyticus JCSC1435 uid62919 |
. |
|
Staphylococcus caprae C87 uid61125 |
. |
|
Staphylococcus epidermidis ATCC 12228 uid57861 |
. |
|
Staphylococcus warneri SG1 uid187059 |
. |
|
Staphylococcus aureus 04 02981 uid161969 |
. |
|
Staphylococcus pettenkoferi VCU012 uid179999 |
. |
|
Staphylococcus arlettae CVD059 uid175126 |
. |
|
Staphylococcus equorum Mu2 uid169178 |
. |
|
Staphylococcus saprophyticus ATCC 15305 uid58411 |
. |
Planococcaceae |
Sporosarcina newyorkensis uid70561 |
. |
(nodes 1976-1982) |
Planococcus antarcticus DSM 14505 uid167855 |
. |
|
Planococcus donghaensis MPA1U2 uid63099 |
. |
|
Solibacillus silvestris StLB046 uid168516 |
. |
|
Bacillus B14905 uid54613 |
. |
|
Lysinibacillus sphaericus C3 41 uid58945 |
. |
|
Kurthia JC30 uid174325 |
. |
|
Kurthia JC8E uid174327 |
. |
Listeria |
Listeria grayi DSM 20601 uid55523 |
. |
(nodes 1983-1986) |
Listeria ivanovii PAM 55 uid73473 |
. |
|
Listeria seeligeri serovar 1 2b SLCC3954 uid46215 |
. |
|
Listeria monocytogenes 07PF0776 uid162185 |
. |
|
Listeria welshimeri serovar 6b SLCC5334 uid61605 |
. |
Bacillaceae |
Anoxybacillus flavithermus WK1 uid59135 |
. |
(nodes 1988-2039) |
Geobacillus thermoleovorans CCB US3 UF5 uid82949 |
. |
|
Geobacillus G11MC16 uid55035 |
. |
|
Geobacillus thermodenitrificans NG80 2 uid58829 |
. |
|
Geobacillus thermoglucosidans TNO 09 020 uid181720 |
. |
|
Geobacillus WCH70 uid59045 |
. |
|
Bacillus methanolicus MGA3 uid179596 |
. |
|
Bacillus 2 A 57 CT2 uid62059 |
. |
|
Bacillus NRRL B 14911 uid54211 |
. |
|
Bacillus 1NLA3E uid81841 |
. |
|
Bacillus bataviensis LMG 21833 uid178560 |
. |
|
Bacillus coahuilensis m4 4 uid54797 |
. |
|
Bacillus SG 1 uid54663 |
. |
|
Bacillus m3 13 uid59767 |
. |
|
Bacillus 10403023 uid174324 |
. |
|
Bacillus megaterium DSM319 uid48371 |
. |
|
Bacillus pseudomycoides DSM 12442 uid55213 |
. |
|
Bacillus mycoides DSM 2048 uid55207 |
. |
|
Bacillus weihenstephanensis KBAB4 uid58315 |
. |
|
Bacillus 7 6 55CFAA CT2 uid80427 |
. |
|
Bacillus cereus 03BB102 uid59299 |
. |
|
Bacillus anthracis A0248 uid59385 |
. |
|
Bacillus thuringiensis Al Hakam uid58795 |
. |
|
Bacillus licheniformis ATCC 14580 uid58097 |
. |
|
Bacillus HYC 10 uid176491 |
. |
|
Bacillus pumilus SAFR 032 uid59017 |
. |
|
Bacillus 5B6 uid161591 |
. |
|
Bacillus amyloliquefaciens DSM 7 uid53535 |
. |
|
Bacillus atrophaeus 1942 uid59887 |
. |
|
Bacillus mojavensis RO H 1 uid171173 |
. |
|
Bacillus subtilis 168 uid57675 |
. |
|
Bacillus coagulans 2 6 uid68053 |
. |
|
Bacillus smithii 7 3 47FAA uid80423 |
. |
|
Bacillus azotoformans LMG 9581 uid178561 |
. |
|
Ornithinibacillus TW25 uid72367 |
. |
|
Lentibacillus Grbi uid86863 |
. |
|
Oceanobacillus iheyensis HTE831 uid57867 |
. |
|
Oceanobacillus Ndiop uid174322 |
. |
|
Salimicrobium MJ3 uid176218 |
. |
|
Halobacillus BAB 2008 uid184766 |
. |
|
Halobacillus halophilus DSM 2266 uid162033 |
. |
|
Amphibacillus xylanus NBRC 15112 uid176453 |
. |
|
Exiguobacterium AT1b uid59093 |
. |
|
Exiguobacterium antarcticum B7 uid176125 |
. |
|
Exiguobacterium sibiricum 255 15 uid58053 |
. |
|
Bacillus macauensis ZFHKF 1 uid169222 |
. |
|
Bacillus halodurans C 125 uid57791 |
. |
|
Bacillus clausii KSM K16 uid58237 |
. |
|
Bacillus alcalophilus ATCC 27647 uid173850 |
. |
|
Bacillus pseudofirmus OF4 uid45847 |
. |
|
Bacillus selenitireducens MLS10 uid49513 |
. |
|
Bacillus cellulosilyticus DSM 2522 uid43329 |
. |
|
Caldalkalibacillus thermarum TA2 A1 uid67815 |
. |
Sporolactobacillus |
Sporolactobacillus inulinus CASD uid82635 |
. |
(node 2041) |
Sporolactobacillus vineae DSM 21990 SL153 uid171990 |
. |
Paenibacillaceae |
Brevibacillus laterosporus GI 9 uid180972 |
. |
(node 2043-2062 |
Brevibacillus agri BAB 2500 uid184804 |
. |
|
Brevibacillus brevis NBRC 100599 uid59175 |
. |
|
Desmospora 8437 uid67093 |
. |
|
Paenibacillus alvei DSM 29 uid174248 |
. |
|
Paenibacillus dendritiformis C454 uid82723 |
. |
|
Paenibacillus popilliae ATCC 14706 uid180969 |
. |
|
Paenibacillus oral taxon 786 D14 uid55903 |
. |
|
Paenibacillus peoriae KCTC 3763 uid167853 |
. |
|
Paenibacillus terrae HPL 003 uid82371 |
. |
|
Paenibacillus polymyxa E681 uid53477 |
. |
|
Paenibacillus lactis 154 uid75105 |
. |
|
Paenibacillus vortex V453 uid61489 |
. |
|
Paenibacillus Y412MC10 uid41127 |
. |
|
Thermobacillus composti KWC4 uid74021 |
. |
|
Paenibacillus curdlanolyticus YK9 uid51723 |
. |
|
Paenibacillus JDR 2 uid59021 |
. |
|
Paenibacillus JC66 uid174323 |
. |
|
Paenibacillus HGF7 uid67401 |
. |
|
Paenibacillus elgii B69 uid76799 |
. |
|
Paenibacillus mucilaginosus 3016 uid89377 |
. |
Alicylobacillaceae |
Kyrpidia tusciae DSM 2912 uid48361 |
. |
(node 2063-2064) |
Alicyclobacillus acidocaldarius DSM 446 uid59199 |
. |
|
Alicyclobacillus hesperidum URH17 3 68 uid174618 |
Erysipelotrichi |
Erysipelotrichi |
Clostridium spiroforme DSM 1552 uid54607 |
(nodes 2066-2080) |
(nodes 2066-2080) |
Clostridium ramosum DSM 1402 uid54811 |
. |
|
Coprobacillus 3 3 56FAA uid80685 |
. |
|
Catenibacterium mitsuokai DSM 15897 uid54829 |
. |
|
Coprobacillus 29 1 uid62161 |
. |
|
Erysipelothrix rhusiopathiae Fujisawa uid68021 |
. |
|
Eubacterium biforme DSM 3989 uid55117 |
. |
|
Eubacterium 3 1 31 uid81761 |
. |
|
Eubacterium dolichum DSM 3991 uid54609 |
. |
|
Clostridium HGF2 uid61051 |
. |
|
Erysipelotrichaceae bacterium 21 3 uid81609 |
. |
|
Holdemania filiformis DSM 12042 uid55297 |
. |
|
Bulleidia extructa W1219 uid43197 |
. |
|
Solobacterium moorei F0204 uid62281 |
. |
|
Haloplasma contractile SSD 17B uid67925 |
. |
|
Turicibacter PC909 uid46977 |
Mollicutes |
Acholeplasmataceae |
Acholeplasma laidlawii PG 8A uid58901 |
(nodes 2081-2119) |
(nodes 2082-2084) |
Candidatus Phytoplasma australiense uid61641 |
. |
|
Aster yellows witches broom phytoplasma AYWB uid58297 |
. |
|
Onion yellows phytoplasma OY M uid58015 |
. |
Micoplasmataceae |
Spiroplasma melliferum IPMB4A uid185130 |
. |
(nodes 2085-2119) |
Mesoplasma florum L1 uid58055 |
. |
|
Mycoplasma putrefaciens KS1 uid72481 |
. |
|
Mycoplasma G5847 uid184764 |
. |
|
Mycoplasma mycoides capri LC 95010 uid66189 |
. |
|
Mycoplasma leachii 99 014 6 uid162031 |
. |
|
Mycoplasma capricolum ATCC 27343 uid58525 |
. |
|
Ureaplasma parvum serovar 3 ATCC 27815 uid58887 |
. |
|
Ureaplasma urealyticum serovar 10 ATCC 33699 uid59011 |
. |
|
Mycoplasma iowae 695 uid74019 |
. |
|
Mycoplasma penetrans HF 2 uid57729 |
. |
|
Mycoplasma gallisepticum CA06 2006 052 5 2P uid172630 |
. |
|
Mycoplasma genitalium G37 uid57707 |
. |
|
Mycoplasma pneumoniae 309 uid85495 |
. |
|
Mycoplasma suis Illinois uid61897 |
. |
|
Candidatus Mycoplasma haemolamae Purdue uid171259 |
. |
|
Mycoplasma wenyonii Massachusetts uid170731 |
. |
|
Mycoplasma haemocanis Illinois uid82367 |
. |
|
Mycoplasma haemofelis Langford 1 uid62461 |
. |
|
Mycoplasma arthritidis 158L3 1 uid58005 |
. |
|
Mycoplasma hominis ATCC 23114 uid41875 |
. |
|
Mycoplasma hyorhinis GDL 1 uid87003 |
. |
|
Mycoplasma conjunctivae uid59325 |
. |
|
Mycoplasma hyopneumoniae 168 uid162053 |
. |
|
Mycoplasma ovipneumoniae SC01 uid79051 |
. |
|
Mycoplasma mobile 163K uid58077 |
. |
|
Mycoplasma pulmonis UAB CTIP uid61569 |
. |
|
Mycoplasma columbinum SF7 uid72177 |
. |
|
Mycoplasma fermentans JER uid53543 |
. |
|
Mycoplasma agalactiae PG2 uid61619 |
. |
|
Mycoplasma bovis HB0801 uid168665 |
. |
|
Mycoplasma alligatoris A21JP2 uid46947 |
. |
|
Mycoplasma anatis 1340 uid71183 |
. |
|
Mycoplasma synoviae 53 uid58061 |
. |
|
Mycoplasma canis PG 14 uid180388 |
. |
|
Mycoplasma cynos C142 uid184824 |